Yes at the output thing. Not sure about pipes, but the machines definately work with chests/relays.
It does plenty that isn't already in the pack, like fully automatic animal breeding and age seperation setups, milkers, fishing machines, and even sewage collection (yay?) It is sort of like Forestry (which, frankly, copied a lot of the concepts that it started with from the old MFR
) but with a bigger focus on animal farming, which is an area that is lacking pretty badly in FTB currently. Heck, it even lets you juice your animals, and who doesn't like a hefty glass of sheep juice? (Actually, not for drinking, but still xD)