I had a quest book the first time, but it was telling me that Quest mode was not active and you need cheat commands to activate. Not sure what map that was, it could have been an older one. I cleared my save folder and redownloaded, to get fresh saves. After changing the config UseEditor to false, everything seemed fine and I had 2 quest books.
On a side note, Frozen map, I'd gone creative and was flying to explore, and that also crashed me to desktop a few times.
Glad to hear you've solved some of the problems. I've since uploaded a new update and made a new Swampland biome since yours crashed and included an extra quest book in all 4 saves just to make sure everyone gets at least one to start with. It'll probably take a few days to get it approved. If you get your Swampland one to work properly you won't need to DL the update unless you want to. I neglected to update the actual version number for 1.3.1 but as my brother used to say, 'That's what you call a bit of bad luck for the customer'.