Here are my current setups, nothing really new (except getting selected bee out of the system), but maybe someone will find it interesting. First there is main production line with purebreads:
It is mirrored on the other side (I should add more signs), light on indicate, that there is no frame. Here is the view from the basement:
Overall principle is the same, as explained in my post in other thread. Gates are iron autarchic, with two conditions: items in inventory -> energy pulsar, no frames -> redstone signal.
Overview of the processing area:
I'm just starting to make alvearies. And what is this thing in the corner with weird facade?:
View from the bottom, this chest is irrevelant(just temporary thing for some cultivated drones I needed):
Well, you can select type of the bee in the apiarist pipe hidden behind this facade and insert princess into the apiary. After some time these princess will become purebread of selected type and will be delivered to chest. In hindsight I should connect princess insertion to the hopper, so I could convert up to 5 princess at the time.
Here is my breading room, equipped with 2 purebread replicators:
It is quite simple, bees from 2 outer apiaries are replicated in 6 inner (3 for one outer apiary). when lever (red pipe wire) is active. If I want to bread some traits in, I just put a bee with this trait in one apiary, bee to transfer trait into other, put 6 princesses (any suitable for normal condition) and flip the levers to run breading. After I have 3 pairs of princess/drone each of these species, I just cross combine them two times (after one breading these new bees, if no mutation can happen, all the bees will be practically identical, only which gene is active can differ). Then I just select the best outcome and bread it further, although often some more manual refining is needed. Currently I have fast nocturnal cave flyer cultivated and the same imperial.