I see why you're finding some engines cheaty: Ender tanks and tesseracts. Stop using them. Use pipes/liquiducts, pumps/aqueous-accumulators, and mining wells; the key to non-cheatiness is having infrastructure requirements and effort involved. To echo part of what Namae said above, consider nixing aqueous accumulators, too, since they appear to make the water move with magic.
You could even nix long-haul pipes, since Railcraft has tank carts.
You could even nix long-haul pipes, since Railcraft has tank carts.