If you place a tesseract adjacent to the ender quarry (you are using the XU ender quarry, right?), another adjacent to an ME Interface in your main network (either stick it next to a full-block Interface or slap the flat-panel version on the side), and configure them correctly, it should work. Alternatively, you could do the same thing with ender chests; just do note that you'll need to use Import Buses on the overworld-side chest to get the items into your network, since the chest won't push them automatically.
- How are you powering your quarry? It needs RF, and quite a lot of it, so if you're not giving it any, that's probably why it's not working.
- How have you configured your tesseracts? They both need to be on the same channel, and the one on your quarry should be set to send items, while the one in your base should be set to receive items. In addition, if you want to power your quarry through the tesseracts, the one in your base should also be set to send energy, while the one in the Deep Dark is set to receive it.
- If you're using enderchests, make sure that you're using the ChickenBones enderchests, rather than the vanilla ones (which do not accept items from automation); and also make sure that both chests have the same color combination, and that they're either not diamond-locked or are diamond-locked to the same player.