I too experienced the 'duplicate mods' screen (on Linux, but it's been reported on Windows and Mac as well) when updating the Direwolf20 1.6.4 pack from release 1.0.0 to 1.0.2 ; this issue also persisted across a forced update.
It is not unreasonable for a Force Update to nuke and pave the mods folder (and possibly some other files); it should /force/ a clean default installation. There should either be an option to force a config update standalone or to include that with 'force update'.
Also, when forcing the update I had to (on my slow connection) re-download the pack even though there was a perfectly good local cache. The local cache should be verified by size, checksum, and successful parsing verification (does this read the way the launcher expects with no errors); only of those fail should the asset be re-downloaded.
It is not unreasonable for a Force Update to nuke and pave the mods folder (and possibly some other files); it should /force/ a clean default installation. There should either be an option to force a config update standalone or to include that with 'force update'.
Also, when forcing the update I had to (on my slow connection) re-download the pack even though there was a perfectly good local cache. The local cache should be verified by size, checksum, and successful parsing verification (does this read the way the launcher expects with no errors); only of those fail should the asset be re-downloaded.