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I cant figure out the problem, it looks like your world has issues has problems loading the chunks when it gets out of the nether, but I have no idea what is causing it.[DOUBLEPOST=1412486948][/DOUBLEPOST]Nevermind, I found a thread on the site which has a couple of fixes.
To make sure it is fixed, I suggest deleting the chunks the first portal came out on (25x25 chunk area.) but I understand this may not be ideal since it could be your base.