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Weird that this isn't fixed. In theory you could just use some basic regular expression to find the tag, and ignore everything in those lines (inclusive)...
Atom-MineTweaker plugin now has support for mods, and smarter function recognition! The mod support is not fully complete. It is currently just syntax highlighting; no auto-completion for it yet.
3.1.0:
This is so overly complicated.
To register blocks I do:
GameRegistry.registerBlock(blockName, blockName);
And for textures, in the block's constructor:
this.setBlockTextureName("modid:texture_name");